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Committee on Virology
Harvard Medical School
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GenBank Nucleotide Sequences for Orthoreoviruses and Aquareoviruses

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Click on a sequence file name below to see specific entries in GenBank.

In this resource, we have listed links to selected GenBank sequence files for representative strains of each viral species or genogroup shown in red italics. Sequence files that do not encompass the complete protein-coding region of the respective gene segment or that seem to contain one or more important error (e.g., a frameshift in the coding region) have been omitted from the listed links. The "last modified" date for this resource is shown at bottom.

Jump To: Nonfusogenic Mammalian Reoviruses | Nelson Bay Reoviruses | Baboon Reovirus
Avian Reoviruses | Reptilian Reoviruses | Aquareoviruses

Genus Orthoreovirus
  Nonfusogenic Mammalian Reoviruses
 
Segment Sequence Files
L1: M31058-T3D (Wiener and Joklik)
M31057-T2J (Wiener and Joklik)
M24734-T1L (Wiener and Joklik)
AF368033-Ndelle (Attoui et al.)
L2: J03488-T3D (Seliger et al.)
AF378009-T3A (Breun et al.)
AF378005-T2J (Breun et al.)
AF378003-T1L (Breun et al.)
L3: AF129822-T3D (Harrison et al.)
AF129821-T2J (Harrison et al.)
AF129820-T1L (Harrison et al.)
M1:

M27761-T3D (Wiener et al.)
AF461684-T3D (Parker et al.)
AF461683-T3D (Parker et al.)
AF124519-T2J (Yin et al.)
X59945-T1L (Zou and Brown)
AF461682-T1L (Parker et al.)
M2:

M20161-T3D (Jayasuriya et al.)
U24260-T3A (Hooper and Fields)
M19355-T2J (Wiener and Joklik)
M19345-T1L (Wiener and Joklik)
AF490617-T1L (Chandran et al.)
AF368034-Ndelle (Attoui et al.)

M3: AF174384-T3D (McCutcheon et al.)
AF174383-T2J (McCutcheon et al.)
AF174382-T1L (McCutcheon et al.)
Segment Sequence Files
S1: X01161-T3D (Nagata et al., Bassel-Duby et al.)
L37677-T3A (Dermody et al.)
M35964-T2J (Nibert et al.)
M32861-T2J (Duncan et al.)
M35963-T1L (Nibert et al.)
M32860-T1L (Duncan et al.)
AF368035-Ndelle (Attoui et al.)
S2: M25780-T3D (Wiener et al.)
L19776-T3D (Dermody et al.)
L19773-T3A (Chappell et al.)
L19775-T2J (Dermody et al.)
L19774-T1L (Dermody et al.)
M17598-T1L (George et al.)
AF368036-Ndelle (Attoui et al.)
S3: X01627-T3D (Richardson and Furuichi)
U35353-T3A (Goral et al.)
M18390-T2J (Wiener and Joklik)
M18389-T1L (Wiener and Joklik)
M14325-T1L (George et al.)
S4: K02739-T3D (Giantini et al.)
U15081-T3A (Kedl et al.)
X60066-T2J (Seliger et al.)
X61586-T1L (Seliger et al.)
M13139-T1L (Atwater et al.)
AF368037-Ndelle (Attoui et al.)
  Nelson Bay Reoviruses
 
Segment Sequence Files
L1:  
L2:  
L3:  
M1:  
M2:  
M3:  
Segment Sequence Files
S1: AF218360-NBV (Schmulevitz et al.)
AY357730-Pulau (Cummins et al.)
S2: AF059718-NBV (Duncan)
AY357731-Pulau (Cummins et al.)
S3: AF059726-NBV (Duncan)
AY357732-Pulau (Cummins et al.)
S4: AF059722-NBV (Duncan)
AY357733-Pulau (Cummins et al.)

 
  Baboon Reovirus
 
Segment Sequence Files
L1:  
L2:  
L3:  
M1:  
M2:  
M3:  
Segment Sequence Files
S1: AF059719-BRV (Duncan)
S2: AF059723-BRV (Duncan)
S3: AF059727-BRV (Duncan)
S4: AF406787-BRV (Dawe and Duncan)

 
  Avian Reoviruses
 
Segment Sequence Files
L1: AY641735-S1133 (Su et al.)
AY547458-S1133(Touris-Otero et al.)
AY641741-1733 (Song et al.)
L2:  
L3: AY652693-S1133 (Liu et al.)
AF384171-1733 (Hsiao et al.)
M1: AY639610-S1133 (Su et al.)
AY639612-1733 (Su et al.)
AY557189-176 (Noad et al.)
AY557188-138 (Noad et al.)
M2: AY635934-S1133 (Su and Lee)
AY635938-1733 (Su and Lee)
AY750053-176 (Noad et al.)
AY750052-138 (Noad et al.)
M3: AY573904-S1133 (Su et al.)
AY608700-S1133 (Touris-Otero et al.)
AY573906-1733 (Su et al.)
AY303993-1733 (Touris-Otero et al.)
AY557191-176 (Noad et al.)
AY557190-138 (Noad et al.)
Segment Sequence Files
S1:

AF330703-S1133 (Bodelon et al.)
AF004857-1733 (Vakharia et al.)
AF218358-176 (Shmulevitz et al.)
AF218359-138 (Shmulevitz et al.)
S2:

AF104311-S1133 (Yin et al.)
AF293773-1733 (Liu and Huang)
AF059716-176 (Duncan)
AF059717-138 (Duncan)
S3:

AO20642-S1133 (Yin et al.)
AF004856-1733 (Vakharia)
AF059720-176 (Duncan)
AF059721-138 (Duncan)
S4:

AOU95952-S1133 (Chiu and Lee)
AY303992-1733 (Touris-Otero et al.)
AF059724-176 (Duncan)
AF059725-138 (Duncan)
  Reptilian Reoviruses
 
Segment Sequence Files
L1:  
L2:  
L3:  
M1:  
M2:  
M3:  
Segment Sequence Files
S1: AY238887-python (Duncan et al.)
S2:  
S3: AY238886-python (Duncan et al.)
S4:  
Genus Aquareovirus
  Genogroup A
 
Segment Sequence Files
S1: AF418294-chum_salmon (Rao et al.)
S2: AF418295-chum_salmon (Rao et al.)
S3: AF418296-chum_salmon (Rao et al.)
S4:  
S5: AF418298-chum_salmon (Rao et al.)
S6: AY235428-threadfin (Seng et al.)
Segment Sequence Files
S7:  
S8: AF418301-chum_salmon (Rao et al.)
AF450321-striped_bass (Attoui et al.)
S9: AF418302-chum_salmon (Rao et al.)
S10: AF418303-chum_salmon (Rao et al.)
U83396-striped_bass (Lupiani et al.)
AF450322-striped_bass (Attoui et al.)
AY236219-threadfin (Seng et al.)
S11: AF524892-threadfin (Seng et al.)
  Genogroup B
 
Segment Sequence Files
S1:  
S2:  
S3:  
S4:  
S5:  
S6:  
Segment Sequence Files
S7:  
S8:  
S9:  
S10: U90430-coho_salmon (Lupiani et al.)
S11:  
  Genogroup C
 
Segment Sequence Files
S1: AF260511S1-grass_carp (Fang et al.)
AF403398-golden_shiner (Attoui et al.)
S2: AF260511S2-grass_carp (Fang et al.)
AF284502-grass_carp (Qiu et al.)
AF403399-golden_shiner (Attoui et al.)
S3: AF260511S3-grass_carp (Fang et al.)
AF284503-grass_carp (Qiu et al.)
AF403400-golden_shiner (Attoui et al.)
S4: AF403390-grass_carp (Attoui et al.)
AF403401-golden_shiner (Attoui et al.)
S5: AF251262-grass_carp (Qiu et al.)
AF403391-grass_carp (Attoui et al.)
AF403402-golden_shiner (Attoui et al.)
S6: AF239175-grass_carp (Qiu et al.)
AF403392-grass_carp (Attoui et al.)
AF403403-golden_shiner (Attoui et al.)
Segment Sequence Files
S7: AF239174-grass_carp (Qiu et al.)
AF403393-grass_carp (Attoui et al.)
AF403404-golden_shiner (Attoui et al.)
S8: AF259053-grass_carp (Qiu et al.)
AF403394-grass_carp (Attoui et al.)
AF403405-golden_shiner (Attoui et al.)
S9: AF284504-grass_carp (Qiu et al.)
AF403395-grass_carp (Attoui et al.)
AF403406-golden_shiner (Attoui et al.)
S10: AF236688-grass_carp (Qiu et al.)
AF403396-grass_carp (Attoui et al.)
AF403407-golden_shiner (Attoui et al.)
S11: AF234321-grass_carp (Qiu et al.)
AF403397-grass_carp (Attoui et al.)
AF403408-golden_shiner (Attoui et al.)
     
  Last modified: September 15, 2005